[
    {
        "id": "authors:v27bb-hhe02",
        "collection": "authors",
        "collection_id": "v27bb-hhe02",
        "cite_using_url": "https://authors.library.caltech.edu/records/v27bb-hhe02",
        "type": "article",
        "title": "Efficient stem cell-derived mouse embryo models for environmental studies",
        "author": [
            {
                "family_name": "Jorgensen",
                "given_name": "Victoria",
                "orcid": "0000-0002-4205-6198",
                "clpid": "Jorgensen-Victoria-Lynn"
            },
            {
                "family_name": "Bao",
                "given_name": "Min",
                "orcid": "0009-0002-4247-3511",
                "clpid": "Bao-Min"
            },
            {
                "family_name": "Junyent",
                "given_name": "Sergi",
                "orcid": "0000-0003-2405-5885",
                "clpid": "Junyent-Sergi"
            },
            {
                "family_name": "H\u00e4felfinger",
                "given_name": "Christoph M.",
                "orcid": "0009-0000-2800-9144",
                "clpid": "H\u00e4felfinger-Christoph-M"
            },
            {
                "family_name": "Amaya",
                "given_name": "Laura",
                "orcid": "0000-0002-8742-9111",
                "clpid": "Amaya-Laura"
            },
            {
                "family_name": "Liao",
                "given_name": "Zhaodi",
                "orcid": "0000-0002-5387-732X",
                "clpid": "Liao-Zhaodi"
            },
            {
                "family_name": "Williams",
                "given_name": "Brian A.",
                "orcid": "0000-0003-3253-611X",
                "clpid": "Williams-Brian-A"
            },
            {
                "family_name": "Chen",
                "given_name": "Dong-Yuan",
                "orcid": "0000-0003-2179-2847",
                "clpid": "Chen-Dong-Yuan"
            },
            {
                "family_name": "Wu",
                "given_name": "Amanda",
                "orcid": "0000-0001-9546-1472"
            },
            {
                "family_name": "Thomson",
                "given_name": "Matt",
                "orcid": "0000-0003-1021-1234",
                "clpid": "Thomson-M-W"
            },
            {
                "family_name": "Zernicka-Goetz",
                "given_name": "Magdalena",
                "orcid": "0000-0002-7004-2471",
                "clpid": "Zernicka-Goetz-M"
            }
        ],
        "abstract": "Blastoids are stem cell-derived structures that mimic natural blastocysts by incorporating all three lineages: trophectoderm, epiblast, and primitive endoderm. However, current methods often yield incomplete structures that fail to cavitate or to form a proper primitive endoderm. To overcome these limitations, we develop a modular approach by aggregating three murine stem cell types: embryonic stem cells (ESCs), ESCs with inducible GATA4 expression (iG4-ESCs), and trophoblast stem cells (TSCs). This method yields cavitated blastocyst-like structures-termed iG4-blastoids-with approximately 80% efficiency. Single-cell RNA sequencing confirms their close resemblance to mature mouse blastocysts. Notably, culturing iG4-blastoids without FGF4 enhances specification of the invasive mural trophectoderm, and approximately 12% of structures undergo post-implantation-like morphogenesis in vitro. Using this model, we show that caffeine, alcohol, nicotine, and amino acid variations affect iG4-blastoids and natural embryos similarly, underscoring their utility as a robust model for investigating the impact of diverse environmental factors on embryogenesis.",
        "doi": "10.1016/j.devcel.2025.08.004",
        "issn": "1534-5807",
        "publisher": "Elsevier",
        "publication": "Developmental Cell",
        "publication_date": "2026-01-14",
        "series_number": "1",
        "volume": "61",
        "issue": "1",
        "pages": "193-207.e6"
    },
    {
        "id": "authors:mb1xy-59651",
        "collection": "authors",
        "collection_id": "mb1xy-59651",
        "cite_using_url": "https://authors.library.caltech.edu/records/mb1xy-59651",
        "type": "article",
        "title": "Fertilization triggers early proteomic symmetry breaking in mammalian embryos",
        "author": [
            {
                "family_name": "Iwamoto-Stohl",
                "given_name": "Lisa K.",
                "orcid": "0000-0003-0776-054X",
                "clpid": "Iwamoto-Stohl-Lisa-K"
            },
            {
                "family_name": "Petelski",
                "given_name": "Aleksandra A."
            },
            {
                "family_name": "Quan",
                "given_name": "Baiyi",
                "orcid": "0000-0001-6313-4274",
                "clpid": "Quan-Baiyi"
            },
            {
                "family_name": "Meglicki",
                "given_name": "Maciej"
            },
            {
                "family_name": "Fu",
                "given_name": "Audrey"
            },
            {
                "family_name": "Nakagawa",
                "given_name": "Shoma",
                "orcid": "0000-0002-7766-613X",
                "clpid": "Nakagawa-Shoma"
            },
            {
                "family_name": "McMahon",
                "given_name": "Breanna",
                "orcid": "0009-0001-3618-9664",
                "clpid": "McMahon-Breanna-M"
            },
            {
                "family_name": "Wang",
                "given_name": "Ting-Yu",
                "orcid": "0000-0002-9014-6825",
                "clpid": "Wang-Ting-Yu"
            },
            {
                "family_name": "Khan",
                "given_name": "Saad"
            },
            {
                "family_name": "Specht",
                "given_name": "Harrison"
            },
            {
                "family_name": "Huffman",
                "given_name": "Gray"
            },
            {
                "family_name": "Derks",
                "given_name": "Jason"
            },
            {
                "family_name": "Junyent",
                "given_name": "Sergi",
                "orcid": "0000-0003-2405-5885",
                "clpid": "Junyent-Sergi"
            },
            {
                "family_name": "Weatherbee",
                "given_name": "Bailey A.T."
            },
            {
                "family_name": "Weberling",
                "given_name": "Antonia"
            },
            {
                "family_name": "Gantner",
                "given_name": "Carlos W."
            },
            {
                "family_name": "Mandelbaum",
                "given_name": "Rachel S."
            },
            {
                "family_name": "Paulson",
                "given_name": "Richard J."
            },
            {
                "family_name": "Lam",
                "given_name": "Lisa"
            },
            {
                "family_name": "Chou",
                "given_name": "Tsui-Fen",
                "orcid": "0000-0003-2410-2186",
                "clpid": "Chou-Tsui-Fen"
            },
            {
                "family_name": "Slavov",
                "given_name": "Nikolai"
            },
            {
                "family_name": "Zernicka-Goetz",
                "given_name": "Magdalena",
                "orcid": "0000-0002-7004-2471",
                "clpid": "Zernicka-Goetz-M"
            }
        ],
        "abstract": "<p>While non-mammalian embryos often rely on spatial pre-patterning, mammalian development has long been thought to begin with equivalent blastomeres. However, emerging evidence challenges this. Here, using multiplexed and label-free single-cell proteomics, we identify over 300 asymmetrically abundant proteins&mdash;many involved in protein degradation and transport&mdash;dividing mouse 2-cell-stage blastomeres into two distinct clusters, which we term alpha and beta. These proteomic asymmetries are detectable as early as the zygote stage, intensify by the 4-cell stage, and correlate with the sperm entry site, implicating fertilization as a symmetry-breaking event. Splitting 2-cell-stage embryos into halves reveals that beta blastomeres possess greater developmental potential than alpha blastomeres. Similar clustering and protein enrichment patterns found in human 2-cell embryos suggest this early asymmetry might be conserved. These findings uncover a previously unrecognized proteomic pre-patterning triggered by fertilization in mammalian embryos, with important implications for understanding totipotency and early lineage bias.</p>",
        "doi": "10.1016/j.cell.2025.11.006",
        "issn": "0092-8674",
        "publisher": "Cell Press",
        "publication": "Cell",
        "publication_date": "2025-12-03"
    },
    {
        "id": "authors:wn4wr-xfb87",
        "collection": "authors",
        "collection_id": "wn4wr-xfb87",
        "cite_using_url": "https://authors.library.caltech.edu/records/wn4wr-xfb87",
        "type": "article",
        "title": "The first two blastomeres contribute unequally to the human embryo",
        "author": [
            {
                "family_name": "Junyent",
                "given_name": "Sergi",
                "orcid": "0000-0003-2405-5885",
                "clpid": "Junyent-Sergi"
            },
            {
                "family_name": "Meglicki",
                "given_name": "Maciej",
                "orcid": "0009-0000-9224-3795",
                "clpid": "Meglicki-Maciej"
            },
            {
                "family_name": "Vetter",
                "given_name": "Roman",
                "orcid": "0000-0003-2901-7036",
                "clpid": "Vetter-Roman"
            },
            {
                "family_name": "Mandelbaum",
                "given_name": "Rachel"
            },
            {
                "family_name": "King",
                "given_name": "Catherine",
                "orcid": "0009-0004-8477-1212",
                "clpid": "King-Catherine"
            },
            {
                "family_name": "Patel",
                "given_name": "Ekta M.",
                "clpid": "Patel-Ekta-M"
            },
            {
                "family_name": "Iwamoto-Stohl",
                "given_name": "Lisa",
                "orcid": "0000-0003-0776-054X",
                "clpid": "Iwamoto-Stohl-Lisa"
            },
            {
                "family_name": "Reynell",
                "given_name": "Clare",
                "orcid": "0000-0003-2733-3334",
                "clpid": "Reynell-Clare"
            },
            {
                "family_name": "Chen",
                "given_name": "Dong-Yuan",
                "orcid": "0000-0003-2179-2847",
                "clpid": "Chen-Dong-Yuan"
            },
            {
                "family_name": "Rubino",
                "given_name": "Patrizia",
                "orcid": "0000-0002-1701-3946",
                "clpid": "Rubino-Patrizia"
            },
            {
                "family_name": "Arrach",
                "given_name": "Nabil",
                "orcid": "0000-0002-0803-9626",
                "clpid": "Arrach-Nabil"
            },
            {
                "family_name": "Paulson",
                "given_name": "Richard J.",
                "clpid": "Paulson-Richard-J"
            },
            {
                "family_name": "Iber",
                "given_name": "Dagmar"
            },
            {
                "family_name": "Zernicka-Goetz",
                "given_name": "Magdalena",
                "orcid": "0000-0002-7004-2471",
                "clpid": "Zernicka-Goetz-M"
            }
        ],
        "abstract": "<div class=\"section-paragraph\">\n<div class=\"section-paragraph\">\n<div class=\"abstract author\">\n<div>\n<p>Retrospective lineage reconstruction of humans predicts that dramatic clonal imbalances in the body can be traced to the 2-cell stage embryo. However, whether and how such clonal asymmetries arise in the embryo is unclear. Here, we performed prospective lineage tracing of human embryos using live imaging, non-invasive cell labeling, and computational predictions to determine the contribution of each 2-cell stage blastomere to the epiblast (body), hypoblast (yolk sac), and trophectoderm (placenta). We show that the majority of epiblast cells originate from only one blastomere of the 2-cell stage embryo. We observe that only one to three cells become internalized at the 8-to-16-cell stage transition. Moreover, these internalized cells are more frequently derived from the first cell to divide at the 2-cell stage. We propose that cell division dynamics and a cell internalization bottleneck in the early embryo establish asymmetry in the clonal composition of the future human body.</p>\n</div>\n</div>\n<div class=\"abstract graphical\"></div>\n</div>\n</div>",
        "doi": "10.1016/j.cell.2024.04.029",
        "issn": "0092-8674",
        "publisher": "Cell Press",
        "publication": "Cell",
        "publication_date": "2024-05-23",
        "series_number": "11",
        "volume": "187",
        "issue": "11",
        "pages": "2838-2854.e17"
    },
    {
        "id": "authors:fas7r-aa477",
        "collection": "authors",
        "collection_id": "fas7r-aa477",
        "cite_using_url": "https://authors.library.caltech.edu/records/fas7r-aa477",
        "type": "article",
        "title": "Topical section: embryonic models (2023) for Current Opinion in Genetics & Development",
        "author": [
            {
                "family_name": "Handford",
                "given_name": "Charlotte E",
                "orcid": "0000-0002-5245-8027",
                "clpid": "Handford-Charlotte-E"
            },
            {
                "family_name": "Junyent",
                "given_name": "Sergi",
                "orcid": "0000-0003-2405-5885",
                "clpid": "Junyent-Sergi"
            },
            {
                "family_name": "Jorgensen",
                "given_name": "Victoria",
                "orcid": "0000-0002-4205-6198",
                "clpid": "Jorgensen-Victoria"
            },
            {
                "family_name": "Zernicka-Goetz",
                "given_name": "Magdalena",
                "orcid": "0000-0002-7004-2471",
                "clpid": "Zernicka-Goetz-M"
            }
        ],
        "abstract": "<p>Stem cell-based mammalian embryo models facilitate the discovery of developmental mechanisms because they are more amenable to&nbsp;<a class=\"topic-link\" title=\"Learn more about genetic from ScienceDirect's AI-generated Topic Pages\" href=\"https://www.sciencedirect.com/topics/biochemistry-genetics-and-molecular-biology/genetics\">genetic</a>&nbsp;and&nbsp;<a class=\"topic-link\" title=\"Learn more about epigenetic from ScienceDirect's AI-generated Topic Pages\" href=\"https://www.sciencedirect.com/topics/biochemistry-genetics-and-molecular-biology/epigenetics\">epigenetic</a>&nbsp;perturbations than natural embryos. Here, we highlight exciting recent advances that have yielded a plethora of models of&nbsp;<a class=\"topic-link\" title=\"Learn more about embryonic development from ScienceDirect's AI-generated Topic Pages\" href=\"https://www.sciencedirect.com/topics/biochemistry-genetics-and-molecular-biology/embryogenesis\">embryonic development</a>. Imperfections in these models highlight gaps in our current understanding and outline future research directions, ushering in an exciting new era for embryology.</p>",
        "doi": "10.1016/j.gde.2023.102134",
        "issn": "0959-437X",
        "publisher": "Elsevier",
        "publication": "Current Opinion in Genetics & Development",
        "publication_date": "2024-02",
        "volume": "84",
        "pages": "102134"
    }
]